Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_366

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_365: 8733 - K17945 TPM1_2 tropomyosin, fungi type, at 848017 to 848980 8733 mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849261 to 850411 8734 mRNA_367: 8735 - ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 850981 to 853734 8735

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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849,294 + 0.7
850,015 - 8734 mRNA_366 0.66 -2.6
850,162 - 8734 mRNA_366 0.78 -1.8
850,460 - -0.4
850,470 + -0.4
850,483 + 1.5
850,486 + -0.3
850,599 - -0.5
850,605 - 0.3
850,619 - 0.6
850,621 + 1.2
850,751 + 0.7
850,776 - -1.1
850,783 - 0.4
850,791 + 2.2
850,795 - -0.5
850,810 - -2.7
850,814 + -1.0
850,817 - 0.5
850,828 + 0.6
850,932 + 0.5
851,013 + -1.0
851,084 + 0.9
851,144 - 0.9
851,255 - 0.0