Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_326

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_325: 8693 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 770334 to 776057 8693 mRNA_326: 8694 - K17983 SHE9 sensitive to high expression protein 9, mitochondrial, at 776267 to 777781 8694 mRNA_327: 8695 - KOG0378 40S ribosomal protein S4, at 778008 to 779249 8695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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775,269 + 8693 mRNA_325 0.86 1.9
775,425 + 8693 mRNA_325 0.89 0.3
775,688 - -0.3
776,012 + 0.3
776,136 - 0.3
776,136 - 1.6
776,139 + 1.8
776,146 - -0.1
776,154 - 1.0
776,164 + -1.0
776,170 - 2.2
776,241 - -0.5
776,478 + 8694 mRNA_326 0.14 1.6
777,052 + 8694 mRNA_326 0.52 0.2
777,187 - 8694 mRNA_326 0.61 -2.3
777,189 + 8694 mRNA_326 0.61 -0.1
777,335 + 8694 mRNA_326 0.70 -0.9
777,617 + 8694 mRNA_326 0.89 0.9
777,627 + 8694 mRNA_326 0.90 0.4
777,790 + 0.1
777,798 + -0.3
777,814 + -0.2
777,819 + 0.6
777,840 + 0.2
778,699 - 8695 mRNA_327 0.56 1.3