Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_308

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_307: 8675 - K12195 CHMP6, VPS20 charged multivesicular body protein 6, at 729336 to 730471 8675 mRNA_308: 8676 - K07952 ARFRP1 ADP-ribosylation factor related protein 1, at 730823 to 731905 8676 mRNA_309: 8677 - K00643 E2.3.1.37, ALAS 5-aminolevulinate synthase, at 732179 to 734206 8677

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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730,515 + 0.8
730,818 + 2.1
730,910 - 0.1
730,923 + 1.6
731,076 - 8676 mRNA_308 0.23 -0.1
731,082 + 8676 mRNA_308 0.24 1.4
731,214 - 8676 mRNA_308 0.36 -0.0
731,350 - 8676 mRNA_308 0.49 0.7
731,353 - 8676 mRNA_308 0.49 -1.7
731,372 + 8676 mRNA_308 0.51 -0.1
731,807 - -0.5
731,814 + 1.4
731,975 - -0.4
731,978 + -0.8
732,094 - 0.5
732,095 - -0.7
732,095 - 0.6
732,096 - 0.7
732,096 + -0.3
732,106 - -0.1
732,108 + 1.2
732,111 + 1.6
732,138 + -0.4
732,142 - 1.4
732,367 - 0.3