Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_295

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_294: 8662 - Hypothetical Protein, at 694833 to 695851 8662 mRNA_295: 8663 - KOG3069 Peroxisomal NUDIX hydrolase, at 696083 to 698097 8663 mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698223 to 702275 8664

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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695,838 - 1.1
695,949 - 0.4
695,975 - 0.2
696,010 - -0.4
696,038 + 1.0
696,272 - 0.2
696,560 - 8663 mRNA_295 0.24 -0.7
696,579 - 8663 mRNA_295 0.25 -2.2
696,735 - 8663 mRNA_295 0.32 -0.9
697,138 + 8663 mRNA_295 0.52 0.0
697,166 - 8663 mRNA_295 0.54 -0.3
697,472 + 8663 mRNA_295 0.69 0.5
697,479 - 8663 mRNA_295 0.69 -0.2
697,496 + 8663 mRNA_295 0.70 -0.6
697,604 + 8663 mRNA_295 0.75 -0.2
697,608 - 8663 mRNA_295 0.76 0.2
697,733 - 8663 mRNA_295 0.82 0.1
697,741 + 8663 mRNA_295 0.82 -0.8
697,751 - 8663 mRNA_295 0.83 -0.5
697,762 - 8663 mRNA_295 0.83 0.5
697,896 - 0.6
697,906 - -0.9
698,034 + -1.2
698,174 - 0.3
698,177 + 2.8
698,189 + 0.4
698,194 + -0.2
698,199 + 0.2
698,203 + 2.2