Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_293

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_292: 8660 - HMMPfam-Endoplasmic reticulum-based factor for assembly of V-ATPase-PF11712, at 692166 to 693130 8660 mRNA_293: 8661 - Hypothetical Protein, at 693672 to 694229 8661 mRNA_294: 8662 - Hypothetical Protein, at 694833 to 695851 8662

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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693,165 - 0.6
693,179 + -0.6
693,194 + 0.8
693,220 + 2.2
693,495 - 0.2
693,620 - -0.6
693,752 - 8661 mRNA_293 0.14 0.0
694,051 - 8661 mRNA_293 0.68 0.9
694,216 + 0.1
694,343 + 2.3
694,349 + 1.0
694,382 - 0.6
694,553 - 0.7
694,637 + 0.3
694,650 + 0.1
694,652 - -0.4
694,971 + 8662 mRNA_294 0.14 -1.0