Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_245

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_244: 8612 - K17778 TIM10 mitochondrial import inner membrane translocase subunit TIM10, at 596277 to 596788 8612 mRNA_245: 8613 - KOG0256 1-aminocyclopropane-1-carboxylate synthase, and related proteins, at 597112 to 598781 8613 mRNA_246: 8614 - Hypothetical Protein, at 598851 to 601414 8614

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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596,209 - 1.6
597,385 - 8613 mRNA_245 0.16 0.6
597,542 + 8613 mRNA_245 0.26 -0.5
597,694 + 8613 mRNA_245 0.35 0.1
598,124 + 8613 mRNA_245 0.61 0.4
598,145 + 8613 mRNA_245 0.62 -0.6
598,299 + 8613 mRNA_245 0.71 0.4
598,386 - 8613 mRNA_245 0.76 0.2
598,939 - 0.7
598,969 - 0.1
598,971 + -0.2
598,974 - -0.0
598,987 - 0.0
598,988 - 0.5
599,002 + 0.1
599,034 + 1.8
599,094 + 0.0
599,130 - 8614 mRNA_246 0.11 0.2
599,148 + 8614 mRNA_246 0.12 0.9
599,153 - 8614 mRNA_246 0.12 0.8
599,153 - 8614 mRNA_246 0.12 1.1
599,153 - 8614 mRNA_246 0.12 0.9
599,154 + 8614 mRNA_246 0.12 -0.4
599,154 + 8614 mRNA_246 0.12 2.1
599,166 + 8614 mRNA_246 0.12 0.3
599,167 - 8614 mRNA_246 0.12 0.5
599,167 - 8614 mRNA_246 0.12 0.1
599,172 + 8614 mRNA_246 0.13 2.8
599,173 + 8614 mRNA_246 0.13 0.8
599,176 - 8614 mRNA_246 0.13 0.4
599,177 + 8614 mRNA_246 0.13 -0.2
599,177 + 8614 mRNA_246 0.13 0.5
599,178 - 8614 mRNA_246 0.13 -0.6
599,183 - 8614 mRNA_246 0.13 0.2
599,185 - 8614 mRNA_246 0.13 -0.4
599,187 + 8614 mRNA_246 0.13 0.3
599,187 - 8614 mRNA_246 0.13 1.1
599,190 + 8614 mRNA_246 0.13 1.2
599,195 - 8614 mRNA_246 0.13 -0.5
599,201 + 8614 mRNA_246 0.14 -1.0
599,201 + 8614 mRNA_246 0.14 -0.8
599,201 + 8614 mRNA_246 0.14 -0.8
599,201 + 8614 mRNA_246 0.14 0.8
599,201 + 8614 mRNA_246 0.14 0.9
599,201 - 8614 mRNA_246 0.14 0.0
599,202 + 8614 mRNA_246 0.14 0.2
599,207 - 8614 mRNA_246 0.14 0.4
599,211 + 8614 mRNA_246 0.14 -1.6
599,213 + 8614 mRNA_246 0.14 0.9
599,218 + 8614 mRNA_246 0.14 0.2
599,223 + 8614 mRNA_246 0.15 0.2
599,228 - 8614 mRNA_246 0.15 3.0
599,254 + 8614 mRNA_246 0.16 0.3
599,324 - 8614 mRNA_246 0.18 -0.2
599,330 + 8614 mRNA_246 0.19 0.5
599,333 + 8614 mRNA_246 0.19 0.2
599,551 + 8614 mRNA_246 0.27 -0.2
599,554 - 8614 mRNA_246 0.27 -0.7
599,617 - 8614 mRNA_246 0.30 0.3
599,668 + 8614 mRNA_246 0.32 0.3
599,731 + 8614 mRNA_246 0.34 2.1
599,734 + 8614 mRNA_246 0.34 -1.0
599,744 + 8614 mRNA_246 0.35 -0.1
599,747 - 8614 mRNA_246 0.35 0.6