Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_199

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_198: 8566 - K02952 RP-S13, rpsM small subunit ribosomal protein S13, at 485103 to 485929 8566 mRNA_199: 8567 - Hypothetical Protein, at 486367 to 488620 8567 mRNA_200: 8568 - K15541 MPE1 protein MPE1, at 489424 to 492149 8568

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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486,175 - -0.3
486,178 - 0.0
486,186 + -0.2
486,191 + 0.6
486,196 + 1.7
486,198 + 0.9
486,218 - 0.3
486,402 - 1.8
486,484 - -0.3
486,640 + 8567 mRNA_199 0.12 0.6
486,760 + 8567 mRNA_199 0.17 1.0
487,369 + 8567 mRNA_199 0.44 0.2
487,493 - 8567 mRNA_199 0.50 0.3
487,514 - 8567 mRNA_199 0.51 1.6
487,534 + 8567 mRNA_199 0.52 0.5
487,658 - 8567 mRNA_199 0.57 -1.0
487,670 - 8567 mRNA_199 0.58 0.5
487,817 + 8567 mRNA_199 0.64 0.0
487,845 + 8567 mRNA_199 0.66 0.5
487,966 - 8567 mRNA_199 0.71 0.8
487,981 + 8567 mRNA_199 0.72 -0.3
487,998 + 8567 mRNA_199 0.72 -0.0
488,138 + 8567 mRNA_199 0.79 0.2
488,241 - 8567 mRNA_199 0.83 -0.3
488,243 - 8567 mRNA_199 0.83 -0.1
488,455 - 0.8
488,854 - -0.8
488,859 - 0.5
488,873 - 0.2
488,873 - 0.0
488,896 + 0.1
488,983 + -0.3
489,000 - -0.5
489,141 - -0.1
489,280 - 0.3
489,291 - 0.7
489,298 + -0.4
489,308 + -0.6
489,308 + 0.0
489,310 - 0.2
489,322 + -0.2
489,484 + 1.2
489,591 - -0.5