Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_192

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_191: 8559 - K18588 COQ10 coenzyme Q-binding protein COQ10, at 466792 to 467615 8559 mRNA_192: 8560 - HMMPfam-SUR7/PalI family-PF06687, at 467837 to 468649 8560 mRNA_193: 8561 - K14573 NOP4, RBM28 nucleolar protein 4, at 469004 to 472832 8561

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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467,906 - 0.1
468,228 + 8560 mRNA_192 0.48 0.0
468,368 + 8560 mRNA_192 0.65 0.8
468,479 - 8560 mRNA_192 0.79 -0.3
468,533 + 8560 mRNA_192 0.86 1.1
468,753 + 1.5
468,771 - -1.2
468,772 + 0.6
468,774 + 0.5
468,776 + -0.2
468,792 - 0.4
468,793 + -1.4
468,804 - -2.0
468,819 + 0.9
468,839 + -0.8
468,950 - 0.8
468,978 - 1.0
469,007 + -1.0