Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_159

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527 mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396327 to 398883 8528

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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393,929 - -0.9
393,963 + 0.6
393,967 - 0.1
394,007 + 1.0
394,047 - -0.1
394,061 + -0.2
394,070 + 0.5
394,221 + 0.1
394,222 - 0.1
394,223 - 0.2
394,226 - 0.0
394,228 + -0.8
394,228 + 0.8
394,234 - 0.1
394,236 + -0.4
394,242 - 0.1
394,252 - -1.2
394,259 + 1.1
394,260 + 0.2
394,260 + 0.7
394,263 - -0.3
394,265 + 0.1
394,265 - 0.5
394,288 - 1.8
394,306 - -0.3
394,333 + 1.7
394,361 - -0.2
394,363 + -0.3
394,375 - 0.1
394,375 - 1.4
394,375 - 0.7
394,382 + -0.6
394,382 + 1.3
394,383 - 0.1
394,399 - 0.0
394,407 + 0.3
394,411 - -0.4
394,413 + 1.5
394,419 + -1.0
394,438 - -0.1
394,444 + 0.1
394,445 - 2.2
394,558 - 1.1
394,568 + -0.3
394,570 + 0.4
394,683 - 8527 mRNA_159 0.17 0.2
394,698 + 8527 mRNA_159 0.19 0.8
394,850 - 8527 mRNA_159 0.32 2.1
394,868 + 8527 mRNA_159 0.34 0.3
394,966 + 8527 mRNA_159 0.43 0.9
395,058 - 8527 mRNA_159 0.51 0.2
395,125 - 8527 mRNA_159 0.57 -0.6
395,573 + -0.0
395,686 + 0.3
396,176 + 1.4