Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_97

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228445 to 229589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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229,618 - 0.9
229,618 + -0.2
229,681 - -0.5
229,688 + 1.0
230,132 + 8465 mRNA_97 0.10 -1.0
230,155 - 8465 mRNA_97 0.11 0.7
230,173 + 8465 mRNA_97 0.11 -0.0
230,329 + 8465 mRNA_97 0.16 -0.1
230,399 - 8465 mRNA_97 0.18 0.1
230,575 - 8465 mRNA_97 0.23 2.0
230,744 + 8465 mRNA_97 0.28 -1.0
230,750 - 8465 mRNA_97 0.29 -0.6
231,010 - 8465 mRNA_97 0.36 0.7
231,079 - 8465 mRNA_97 0.38 -0.6
231,190 - 8465 mRNA_97 0.42 0.6
231,279 - 8465 mRNA_97 0.44 -0.0
231,476 + 8465 mRNA_97 0.50 0.1
231,641 - 8465 mRNA_97 0.55 2.0
231,800 - 8465 mRNA_97 0.60 -1.3
232,261 + 8465 mRNA_97 0.73 0.7
232,277 - 8465 mRNA_97 0.74 0.4
232,833 - -0.5
232,980 + 1.2
232,995 - -0.3
233,157 - -0.4
233,237 + -0.1
233,256 - 0.5
233,256 - 1.7
233,263 - -0.7
233,276 + 1.3
233,282 - 0.6
233,290 + 0.5
233,290 + 0.6
233,290 + -0.1
233,298 - -1.0
233,298 + 2.2
233,298 - -0.1
233,301 + 1.5
233,301 - 1.2
233,301 - -0.7
233,302 + -0.1
233,315 + 0.7
233,316 - 0.3
233,316 + -0.3
233,317 - -0.1
233,317 - 0.7
233,319 - -0.0
233,320 - 1.3
233,321 + 1.8
233,321 - -0.4
233,321 - -0.3
233,323 - 0.3
233,323 - 1.5
233,324 + 0.1
233,324 + 0.9
233,325 + -0.4
233,325 - 0.1
233,326 + -0.7
233,329 + 0.1
233,332 + 0.7
233,335 + 2.6
233,336 + -0.2
233,337 + 0.2
233,337 + -0.5
233,350 + -0.5
233,350 + 1.7
233,354 - -0.9
233,359 + 0.3
233,365 - 0.1
233,365 - 0.1
233,365 + 3.2
233,375 - -0.5
233,379 + 0.4
233,383 + -0.1
233,387 - -0.0
233,404 + -0.9
233,404 + 0.3
233,408 - -0.1
233,436 - -1.9
233,436 - -0.4
233,436 - 0.7
233,437 - -0.6
233,441 + 2.1
233,442 - 0.1
233,443 - -2.0
233,444 + 1.0
233,446 - 0.9
233,448 - 0.2
233,450 + -0.3
233,451 + 0.7
233,452 + -1.3
233,459 - -0.5
233,488 - 0.4
233,491 - 2.0
233,507 + -0.3
233,512 - -0.1
233,518 - 0.6
233,520 - -0.8
233,523 + 0.9
233,529 - -0.8
233,539 - -0.8
233,541 + -0.5
233,549 + -1.0
233,551 + 1.1
233,559 - 0.0
233,560 + 0.5
233,568 + -0.5
233,571 - 0.5
233,573 + 2.3
233,613 + -0.7
233,657 - 0.4
233,706 + -1.4
233,726 + 0.6
233,851 - -0.8
233,852 + 0.5
233,859 - 0.5
233,865 + 1.8
234,006 - 8466 mRNA_98 0.17 1.2
234,139 - 8466 mRNA_98 0.34 0.5