Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_88

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207025 to 210193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210659 to 212272 8456

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
209,692 - 8455 mRNA_87 0.84 -0.5
209,713 + 8455 mRNA_87 0.85 -0.1
209,740 - 8455 mRNA_87 0.86 0.4
209,807 + 8455 mRNA_87 0.88 1.7
209,891 + 0.4
210,158 - 0.2
210,162 + 1.1
210,167 - -2.7
210,173 - -0.1
210,176 + 0.8
210,179 - 3.1
210,179 - -0.5
210,307 + -0.6
210,320 - 0.7
210,321 - 2.7
210,337 + -1.4
210,345 + -2.4
210,368 - 1.4
210,399 - -0.3
210,407 - -0.3
210,418 + -0.5
210,431 + 0.4
210,439 - -0.3
210,449 - -0.7
210,453 - 1.2
210,460 - -0.0
210,476 - 0.5
210,487 + 1.4
210,546 - 0.1
210,568 + -1.0
210,579 + -1.5
210,593 - 0.3
210,600 + 0.2
210,603 - -0.2
210,604 + -0.2
210,610 - -0.0
210,628 + 2.4
210,630 + 0.2
210,637 + 2.0
210,639 - 0.4
210,639 + -1.5
210,645 + 1.4
210,654 - -1.3
210,662 + 1.0
210,663 + 0.5
210,672 + 1.0
210,684 - 0.0
210,772 + 0.6
210,794 + 1.9
210,797 - 2.8
211,078 + 8456 mRNA_88 0.26 1.5
211,503 + 8456 mRNA_88 0.52 -2.4
211,523 + 8456 mRNA_88 0.54 -0.2
211,771 - 8456 mRNA_88 0.69 -0.6
211,778 + 8456 mRNA_88 0.69 2.2
212,220 + 1.6
212,226 + 0.9
212,375 - -0.7
212,410 - -0.5
212,494 + 0.1
212,502 - -0.1
212,504 - -0.2
212,508 + 0.7
212,512 - 1.6
212,524 + -0.0
212,544 - 1.1
212,623 + -0.2
212,623 + -0.7
212,641 + -0.4
212,645 + 0.8
212,652 + 0.1
212,652 - -0.7
212,658 + 1.0
212,663 - -0.7
212,669 + 0.4
212,670 - -0.1
212,677 - -2.2
212,695 - 0.1
212,695 + 0.0
212,801 - 1.8
212,807 + -0.1
212,811 + -0.8
212,821 + -0.9
212,835 - -0.6
212,844 - -0.3
212,853 + 1.2
212,855 + 0.8
212,873 + -0.4
212,875 - 0.2
212,880 + 0.7
212,880 + -0.5
212,900 - 0.7
212,901 - 0.7
212,906 - 1.3
212,933 - -0.7
212,940 - 1.3
212,950 - 0.1
212,961 - 0.0
212,983 + -0.3
213,005 - 0.3
213,025 - 0.8
213,029 + 0.8
213,039 - -0.6
213,043 + 0.6
213,053 + -0.3
213,059 - -0.5
213,066 - 2.1
213,067 + -0.6
213,073 + -0.1
213,074 + 0.0
213,099 + -0.0
213,110 - -1.6
213,112 + -0.6
213,118 + -0.8
213,122 + 0.8
213,125 - 0.3
213,126 + -1.5
213,126 + 0.6
213,127 - -0.0
213,139 + 1.7
213,141 - 0.8
213,156 + 0.6
213,158 + 0.2
213,159 + -0.4
213,165 - 1.0
213,168 - 0.6
213,175 - 1.0