Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_49

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_48: 8416 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 116348 to 117395 8416 mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417 mRNA_50: 8418 - KOG1611 Predicted short chain-type dehydrogenase, at 118975 to 119840 8418

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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116,945 + 8416 mRNA_48 0.57 1.4
117,414 + 2.3
117,652 + 0.3
117,781 - -0.1
117,822 - 8417 mRNA_49 0.14 -0.3
118,675 - 0.1
118,684 + -0.9
118,823 - -0.3
118,865 + 1.1
118,874 + -0.5
118,985 - -2.7
119,302 + 8418 mRNA_50 0.38 1.5
119,387 - 8418 mRNA_50 0.48 0.4
119,413 + 8418 mRNA_50 0.51 1.0
119,416 - 8418 mRNA_50 0.51 0.6
119,416 - 8418 mRNA_50 0.51 -0.5
119,417 - 8418 mRNA_50 0.51 0.5
119,422 + 8418 mRNA_50 0.52 0.2
119,422 + 8418 mRNA_50 0.52 0.5