Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_48

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114589 to 115599 8415 mRNA_48: 8416 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 116348 to 117395 8416 mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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115,372 - 8415 mRNA_47 0.77 -0.1
115,609 - 0.1
115,729 + 1.3
115,808 - 1.4
115,835 + 0.7
115,866 - 0.5
115,920 - -0.5
115,921 + 0.2
115,922 - 0.7
115,931 + 1.1
115,945 + -0.6
115,954 - 0.8
115,969 + 0.2
115,972 + 0.8
115,980 - 0.3
115,988 + 0.2
115,994 + 0.7
115,995 - -1.0
115,998 + 0.5
116,003 + 0.6
116,030 + -0.0
116,037 - -1.2
116,040 + 0.3
116,047 - 0.0
116,052 + -2.1
116,081 + -1.2
116,081 + 1.0
116,154 - 0.0
116,154 + 1.2
116,186 + -0.2
116,192 - -0.4
116,198 + -0.2
116,199 + -0.2
116,231 - 1.5
116,235 + -0.6
116,242 + 0.9
116,270 + 0.1
116,376 - -0.6
116,402 - -0.4
116,467 - 8416 mRNA_48 0.11 -1.7
116,564 - 8416 mRNA_48 0.21 0.7
116,945 + 8416 mRNA_48 0.57 1.4
117,414 + 2.3
117,652 + 0.3
117,781 - -0.1
117,822 - 8417 mRNA_49 0.14 -0.3