Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_33

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_32: 8400 - HMMPfam-Pre-rRNA-processing protein TSR2-PF10273, at 78127 to 78849 8400 mRNA_33: 8401 - HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371, at 79205 to 81384 8401 mRNA_34: 8402 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 81530 to 84325 8402

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
78,998 - 1.8
79,008 - 1.0
79,008 + -0.3
79,024 - 0.2
79,034 + -0.1
79,036 + -0.9
79,041 - -2.1
79,042 + 1.2
79,043 + 2.0
79,190 + 2.4
79,324 + -0.4
79,480 + 8401 mRNA_33 0.13 2.6
79,728 - 8401 mRNA_33 0.24 1.0
80,085 - 8401 mRNA_33 0.40 2.1
80,249 + 8401 mRNA_33 0.48 2.9
80,367 - 8401 mRNA_33 0.53 0.9
80,374 - 8401 mRNA_33 0.54 0.9
80,616 - 8401 mRNA_33 0.65 2.0
80,626 + 8401 mRNA_33 0.65 -0.5
80,666 - 8401 mRNA_33 0.67 0.9
80,977 + 8401 mRNA_33 0.81 0.0
81,101 + 8401 mRNA_33 0.87 1.0
81,113 + 8401 mRNA_33 0.88 -0.2
81,114 - 8401 mRNA_33 0.88 -0.3
81,221 - 1.6
81,232 - 0.7
81,251 - 1.2
81,260 - 0.3
81,275 - 1.8
81,278 + -0.6
81,407 - -1.1
82,155 + 8402 mRNA_34 0.22 0.5