Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8456

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8455: 16823 - K06013 STE24 STE24 endopeptidase, at 1274960 to 1276666 16823 mRNA_8456: 16824 - Hypothetical Protein, at 1276790 to 1279771 16824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,275,929 - 16823 mRNA_8455 0.57 0.7
1,275,934 - 16823 mRNA_8455 0.57 -0.7
1,276,043 + 16823 mRNA_8455 0.63 0.1
1,276,067 - 16823 mRNA_8455 0.65 0.7
1,276,080 + 16823 mRNA_8455 0.66 1.7
1,276,363 + 16823 mRNA_8455 0.82 1.9
1,276,504 - -0.4
1,276,537 + -0.6
1,276,557 + 0.3
1,276,634 - -0.2
1,276,734 + 0.1
1,276,754 - 1.9
1,276,819 - 0.6
1,276,884 + 2.1
1,277,057 + 0.7
1,277,556 - 16824 mRNA_8456 0.26 -0.1
1,277,829 + 16824 mRNA_8456 0.35 -0.2
1,277,995 + 16824 mRNA_8456 0.40 -0.4
1,278,193 + 16824 mRNA_8456 0.47 0.1
1,278,219 + 16824 mRNA_8456 0.48 -0.6
1,278,268 + 16824 mRNA_8456 0.50 -2.1
1,278,299 + 16824 mRNA_8456 0.51 -2.3
1,278,405 - 16824 mRNA_8456 0.54 -0.5
1,278,411 + 16824 mRNA_8456 0.54 -1.4
1,278,465 + 16824 mRNA_8456 0.56 0.4
1,278,623 - 16824 mRNA_8456 0.61 -1.2
1,278,627 - 16824 mRNA_8456 0.62 1.7
1,278,712 - 16824 mRNA_8456 0.64 0.1
1,278,751 - 16824 mRNA_8456 0.66 -1.5
1,278,806 + 16824 mRNA_8456 0.68 1.2
1,279,075 + 16824 mRNA_8456 0.77 1.1
1,279,236 + 16824 mRNA_8456 0.82 0.4
1,279,246 + 16824 mRNA_8456 0.82 -0.2
1,279,248 - 16824 mRNA_8456 0.82 1.3
1,279,249 + 16824 mRNA_8456 0.82 0.0
1,279,423 + 16824 mRNA_8456 0.88 -0.5
1,279,456 - 16824 mRNA_8456 0.89 -0.0
1,279,489 - 0.0
1,279,495 + -0.1
1,279,584 - -0.3
1,279,826 - -0.9
1,279,854 + 0.3
1,279,872 - -0.9
1,279,946 + 2.3
1,279,989 - 0.5
1,279,998 - 1.7
1,280,005 + 0.1
1,280,007 + -0.0
1,280,018 + 0.3
1,280,019 + 0.4
1,280,029 - 0.2
1,280,042 + 0.4
1,280,045 - 0.6
1,280,254 - -0.4
1,280,346 + 0.8
1,280,414 - -0.1
1,280,443 - 0.6
1,280,494 + -0.6
1,280,501 + 1.2
1,280,562 + -0.4
1,280,563 - -1.0
1,280,759 - 1.4
1,280,760 + 0.3