Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8452

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8452: 16820 - Hypothetical Protein, at 1269546 to 1270646 16820 mRNA_8453: 16821 - Hypothetical Protein, at 1271447 to 1272536 16821

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,268,607 - 0.9
1,268,630 - 1.7
1,268,681 + -1.7
1,268,788 + -0.3
1,268,795 - 1.5
1,268,807 + 0.6
1,268,838 - -0.1
1,268,860 - -1.1
1,268,912 + -0.8
1,268,933 + 2.8
1,268,955 + 1.9
1,268,956 + -1.5
1,268,965 + 0.8
1,268,971 + -0.5
1,268,996 + 2.0
1,269,001 + 0.2
1,269,014 - -0.6
1,269,040 + -0.0
1,269,057 + 1.2
1,269,058 + -0.1
1,269,059 + -1.1
1,269,074 - 1.1
1,269,201 + 0.0
1,269,215 - -1.1
1,269,216 + -1.0
1,269,231 - 0.3
1,269,257 + -0.0
1,269,291 - 2.1
1,269,299 + 1.4
1,269,368 - -0.4
1,269,368 - 0.3
1,269,385 + -0.8
1,269,400 - -0.4
1,269,407 + -0.6
1,269,455 - 0.7
1,269,562 + -1.2
1,269,705 - 16820 mRNA_8452 0.14 -0.2
1,269,705 + 16820 mRNA_8452 0.14 -0.4
1,269,716 - 16820 mRNA_8452 0.15 0.3
1,269,867 + 16820 mRNA_8452 0.29 -0.7
1,269,979 - 16820 mRNA_8452 0.39 0.6
1,269,979 + 16820 mRNA_8452 0.39 -2.0
1,269,998 - 16820 mRNA_8452 0.41 -0.2
1,270,128 - 16820 mRNA_8452 0.53 0.9
1,270,144 - 16820 mRNA_8452 0.54 -0.9
1,270,163 - 16820 mRNA_8452 0.56 -0.4
1,270,411 - 16820 mRNA_8452 0.79 0.5
1,270,434 + 16820 mRNA_8452 0.81 0.0
1,270,486 - 16820 mRNA_8452 0.85 -1.9
1,270,573 - -0.6
1,270,681 + 0.6
1,270,718 - -1.3
1,270,828 - -0.2
1,270,930 - -0.7
1,270,968 + -1.7
1,271,041 + -0.5
1,271,070 + -1.2
1,271,118 - -1.4
1,271,135 - -0.3
1,271,138 - -0.1
1,271,148 - -0.4
1,271,157 + 0.2
1,271,174 - -0.8
1,271,306 - -0.1
1,271,339 + 2.0
1,271,522 + -0.4
1,271,565 - 16821 mRNA_8453 0.11 2.5