Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8433

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8432: 16800 - Hypothetical Protein, at 1215314 to 1218685 16800 mRNA_8433: 16801 - SUPERFAMILY--SSF54909, at 1219119 to 1219808 16801 mRNA_8434: 16802 - SUPERFAMILY--SSF55729, at 1219944 to 1220514 16802 mRNA_8435: 16803 - Hypothetical Protein, at 1220760 to 1221557 16803

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,218,293 + 16800 mRNA_8432 0.88 1.5
1,218,594 - -0.5
1,218,848 - 0.0
1,218,866 + -0.2
1,218,872 + 0.3
1,218,883 - -0.8
1,218,895 - 0.7
1,218,899 + -0.1
1,218,925 + -0.1
1,219,029 - 0.6
1,219,034 - -0.2
1,219,094 + 0.3
1,219,195 - 16801 mRNA_8433 0.11 0.3
1,219,328 + 16801 mRNA_8433 0.30 -0.8
1,219,459 + 16801 mRNA_8433 0.49 0.8
1,219,499 + 16801 mRNA_8433 0.55 1.0
1,219,590 + 16801 mRNA_8433 0.68 1.3
1,219,607 + 16801 mRNA_8433 0.71 0.9
1,219,632 - 16801 mRNA_8433 0.74 0.1
1,220,027 - 16802 mRNA_8434 0.15 -0.4
1,220,049 - 16802 mRNA_8434 0.18 0.3
1,220,193 + 16802 mRNA_8434 0.44 0.5
1,220,357 - 16802 mRNA_8434 0.72 -2.0
1,220,489 + 0.8
1,220,794 + -1.1