Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8381

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8380: 16748 - KOG4197 FOG PPR repeat, at 1073691 to 1078543 16748 mRNA_8381: 16749 - Hypothetical Protein, at 1078758 to 1080099 16749 mRNA_8382: 16750 - K00799 GST, gst glutathione S-transferase, at 1080378 to 1081397 16750

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,078,651 + -0.2
1,078,759 + 0.1
1,078,849 - -1.0
1,079,366 - 16749 mRNA_8381 0.45 -0.1
1,079,543 - 16749 mRNA_8381 0.58 0.0
1,079,579 - 16749 mRNA_8381 0.61 -0.1
1,079,701 + 16749 mRNA_8381 0.70 -0.7
1,079,836 - 16749 mRNA_8381 0.80 -0.0
1,080,006 - -0.3
1,080,168 - 1.1
1,080,260 - 0.7
1,080,264 - 0.8
1,080,288 - -0.2
1,080,294 - -0.3
1,080,307 - 1.2
1,080,486 - 16750 mRNA_8382 0.11 1.0
1,080,488 + 16750 mRNA_8382 0.11 -1.1
1,080,601 + 16750 mRNA_8382 0.22 1.7
1,080,776 + 16750 mRNA_8382 0.39 -0.4
1,080,992 - 16750 mRNA_8382 0.60 0.5
1,081,047 + 16750 mRNA_8382 0.66 0.2