Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8360

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8359: 16727 - Hypothetical Protein, at 1029156 to 1031168 16727 mRNA_8360: 16728 - K02739 PSMB7 20S proteasome subunit beta 2, at 1031213 to 1032623 16728 mRNA_8361: 16729 - K06640 ATR serine/threonine-protein kinase ATR, at 1032908 to 1038730 16729

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,030,260 + 16727 mRNA_8359 0.55 -1.0
1,030,577 - 16727 mRNA_8359 0.71 -2.8
1,030,646 + 16727 mRNA_8359 0.74 0.4
1,030,776 - 16727 mRNA_8359 0.80 0.1
1,030,887 + 16727 mRNA_8359 0.86 -0.3
1,031,067 - -0.4
1,031,069 + 0.0
1,031,086 + -1.1
1,031,199 - 1.1
1,031,199 - 1.0
1,031,221 - -0.0
1,031,340 - -0.5
1,031,341 + 1.0
1,031,354 - 16728 mRNA_8360 0.10 0.2
1,031,363 + 16728 mRNA_8360 0.11 -0.5
1,031,368 + 16728 mRNA_8360 0.11 -0.3
1,031,372 - 16728 mRNA_8360 0.11 0.5
1,031,378 + 16728 mRNA_8360 0.12 0.8
1,031,395 - 16728 mRNA_8360 0.13 -0.2
1,032,414 - 16728 mRNA_8360 0.85 0.6
1,032,446 + 16728 mRNA_8360 0.87 0.5
1,032,574 + 0.5
1,032,677 - -0.1