Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8348

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8346: 16714 - Hypothetical Protein, at 991012 to 994561 16714 mRNA_8347: 16715 - Hypothetical Protein, at 994910 to 995448 16715 mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995447 to 998474 16716 mRNA_8349: 16717 - K05349 bglX beta-glucosidase, at 999167 to 1002495 16717

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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994,626 - 0.7
994,652 - 0.9
994,653 - 0.2
994,661 - 0.5
994,662 + 0.1
994,677 + -1.1
994,684 + 0.3
994,808 + 3.0
994,811 - 1.0
994,818 - -0.6
994,823 - -0.2
994,840 - 0.8
994,925 - -0.1
994,929 - 0.6
994,930 - 0.3
994,933 - 0.6
994,936 - -0.3
994,939 + 0.2
994,940 + 1.8
994,948 + 0.1
994,948 - 0.7
994,949 + 1.1
994,961 + -1.3
994,967 + 16715 mRNA_8347 0.11 0.1
994,972 - 16715 mRNA_8347 0.12 0.9
994,973 - 16715 mRNA_8347 0.12 -0.3
994,975 - 16715 mRNA_8347 0.12 0.4
994,978 + 16715 mRNA_8347 0.13 1.5
995,029 - 16715 mRNA_8347 0.22 -0.3
995,048 + 16715 mRNA_8347 0.26 1.7
995,071 - 16715 mRNA_8347 0.30 0.2
995,073 - 16715 mRNA_8347 0.30 1.4
995,089 + 16715 mRNA_8347 0.33 0.4
995,090 + 16715 mRNA_8347 0.33 -0.1
995,102 + 16715 mRNA_8347 0.36 -1.1
995,121 + 16715 mRNA_8347 0.39 -0.5
995,136 + 16715 mRNA_8347 0.42 1.3
995,140 - 16715 mRNA_8347 0.43 0.4
995,146 - 16715 mRNA_8347 0.44 1.3
995,147 + 16715 mRNA_8347 0.44 -0.1
995,154 - 16715 mRNA_8347 0.45 -0.9
995,155 + 16715 mRNA_8347 0.45 0.1
995,161 - 16715 mRNA_8347 0.47 1.0
995,168 - 16715 mRNA_8347 0.48 0.6
995,176 + 16715 mRNA_8347 0.49 -0.3
995,179 - 16715 mRNA_8347 0.50 -0.4
995,194 - 16715 mRNA_8347 0.53 0.6
995,196 + 16715 mRNA_8347 0.53 0.4
995,207 - 16715 mRNA_8347 0.55 0.9
995,208 + 16715 mRNA_8347 0.55 0.3
995,215 + 16715 mRNA_8347 0.57 -0.4
995,221 + 16715 mRNA_8347 0.58 -0.1
995,222 + 16715 mRNA_8347 0.58 -1.3
995,238 - 16715 mRNA_8347 0.61 0.7
995,267 + 16715 mRNA_8347 0.66 0.1
995,283 - 16715 mRNA_8347 0.69 0.5
995,293 + 16715 mRNA_8347 0.71 -0.6
995,301 - 16715 mRNA_8347 0.73 -0.3
995,307 - 16715 mRNA_8347 0.74 1.7
995,308 - 16715 mRNA_8347 0.74 -0.2
995,310 - 16715 mRNA_8347 0.74 0.2
995,314 - 16715 mRNA_8347 0.75 1.6
995,316 - 16715 mRNA_8347 0.75 1.1
995,329 - 16715 mRNA_8347 0.78 0.9
995,339 - 16715 mRNA_8347 0.80 -0.3
995,350 - 16715 mRNA_8347 0.82 -1.4
995,352 + 16715 mRNA_8347 0.82 -0.2
995,353 - 16715 mRNA_8347 0.82 -0.3
995,354 + 16715 mRNA_8347 0.82 1.0
995,370 - 16715 mRNA_8347 0.85 -1.3
995,373 + 16715 mRNA_8347 0.86 -1.0
995,373 - 16715 mRNA_8347 0.86 0.7
995,376 + 16715 mRNA_8347 0.86 -0.0
995,376 + 16715 mRNA_8347 0.86 -0.3
995,444 - 0.4
995,465 - -1.5
995,487 - 0.7
995,548 + 0.3
995,560 - 0.2
996,268 + 16716 mRNA_8348 0.27 2.2
996,295 - 16716 mRNA_8348 0.28 1.3
996,702 + 16716 mRNA_8348 0.41 0.5
997,097 - 16716 mRNA_8348 0.54 1.2
997,300 + 16716 mRNA_8348 0.61 -0.1
998,160 + 16716 mRNA_8348 0.90 -3.0
998,191 + -0.5
998,323 + 0.3
998,335 - 0.0
998,354 + 2.0
998,422 - -0.1
998,423 - 0.2
998,429 + 0.7
998,443 + 0.2
998,472 + -0.1
998,472 - 0.4
998,481 + -0.3
998,498 - 1.4
998,500 + -0.4
998,515 + -2.3
998,524 - 0.6
998,579 - -0.4
998,594 - -0.8
998,600 - -0.2
998,615 + -0.6
998,630 + -0.1
998,633 - 0.1
998,641 - 0.3
998,643 + -0.6
998,657 - -0.4
998,659 - -0.0
998,663 + 0.4
998,698 - -0.6
998,705 - -0.4
998,724 - 0.3
998,745 - -0.9
998,751 - 0.8
998,754 - 0.2
998,755 - 1.3
998,756 + 0.6
998,763 - -1.9
998,767 - -1.2
998,770 - -0.2
998,771 - 0.8
998,773 + 0.1
998,786 + 0.7
998,786 - -0.4
998,788 - -0.7
998,792 - -0.3
998,797 - 0.7
998,801 - 0.4
998,802 - -0.3
998,804 - 0.7
998,810 + -0.4
998,810 + -2.3
998,814 + -0.3
998,817 + 0.0
998,830 - -0.1
998,842 - 0.3
998,845 + -0.7
998,861 + 0.4
998,867 + 0.5
998,880 - -0.4
998,881 + -1.2
998,935 - 0.0
998,940 - 2.1
998,940 - 0.2
998,940 + 0.7
998,968 - -0.8
998,995 + 0.6
999,009 - 1.5
999,038 - -0.1
999,041 - 1.0
999,049 + 2.2
999,061 + -0.2
999,074 + -0.5
999,078 + 0.8
999,090 - 1.1
999,109 + -1.0
999,127 + 0.2