Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8343

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8342: 16710 - Hypothetical Protein, at 981863 to 982243 16710 mRNA_8343: 16711 - Hypothetical Protein, at 983086 to 983598 16711 mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984444 to 989069 16712

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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982,260 - 0.1
982,390 - 0.5
982,640 - 2.0
982,655 - -2.9
982,692 - -1.2
982,693 + -1.4
982,834 + 1.2
982,856 + -0.2
982,986 + 0.9
982,991 + 1.6
983,132 + -0.2
983,134 - -0.4
983,136 + -1.0
983,136 + 1.9
983,162 + 16711 mRNA_8343 0.15 0.7
983,271 + 16711 mRNA_8343 0.36 2.0
983,832 - -0.1
983,943 - -1.3
984,261 - -1.2
984,265 - 0.1
984,429 - -0.2
984,450 - 2.2