Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8329

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8327: 16695 - K10251 HSD17B12, KAR, IFA38 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase, at 948369 to 949936 16695 mRNA_8328: 16696 - Hypothetical Protein, at 950123 to 950641 16696 mRNA_8329: 16697 - KOG0527 HMG-box transcription factor, at 950835 to 951817 16697 mRNA_8330: 16698 - BLAST clp1-like protein [Schizophyllum commune H4-8], at 951883 to 952795 16698

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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950,388 - 16696 mRNA_8328 0.51 -0.8
950,526 + 16696 mRNA_8328 0.78 -0.0
950,697 - -0.8
950,818 + 1.0
950,827 + -0.1
950,953 + 16697 mRNA_8329 0.12 -0.3
951,119 - 16697 mRNA_8329 0.29 -1.3
951,860 - 0.9
952,185 + 16698 mRNA_8330 0.33 2.3
952,214 - 16698 mRNA_8330 0.36 0.0
952,306 - 16698 mRNA_8330 0.46 0.7
952,326 - 16698 mRNA_8330 0.49 0.9
952,471 - 16698 mRNA_8330 0.64 0.6
952,479 + 16698 mRNA_8330 0.65 0.2
952,479 - 16698 mRNA_8330 0.65 -0.2
952,565 + 16698 mRNA_8330 0.75 -0.7
952,600 + 16698 mRNA_8330 0.79 2.8
952,627 - 16698 mRNA_8330 0.81 0.0
952,736 - -0.1
952,741 + 0.3
952,759 + 0.7
952,768 + -1.3