Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8314

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8313: 16681 - K11541 URA2 carbamoyl-phosphate synthase / aspartate carbamoyltransferase, at 909559 to 916766 16681 mRNA_8314: 16682 - K03321 TC.SULP sulfate permease, SulP family, at 917700 to 921050 16682 mRNA_8315: 16683 - Hypothetical Protein, at 921677 to 922300 16683

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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916,992 - -0.4
916,998 + -1.4
917,000 + 1.1
917,014 + 2.0
917,141 + -0.0
917,143 - -1.0
917,147 - -0.9
917,159 + -0.5
917,169 + 2.1
917,171 + 0.2
917,198 + 0.4
917,304 + 1.1
917,331 - 0.2
917,331 + -0.5
917,356 - 1.2
917,439 + 0.4
917,442 - 0.0
917,445 + 0.1
917,446 - -1.2
917,453 - 2.0
917,460 - 0.2
917,493 - 0.6
917,493 - -0.5
917,495 + 0.3
917,498 - 0.3
917,499 + -1.0
917,502 - -0.6
917,506 + 1.9
917,514 - 0.1
917,573 + -0.2
917,649 - -2.0
917,918 - 2.1
918,097 + 16682 mRNA_8314 0.12 1.3
918,102 - 16682 mRNA_8314 0.12 -1.2
918,369 - 16682 mRNA_8314 0.20 -0.2
918,507 + 16682 mRNA_8314 0.24 0.7
918,666 - 16682 mRNA_8314 0.29 -0.3
918,800 - 16682 mRNA_8314 0.33 0.7
918,802 - 16682 mRNA_8314 0.33 2.4
918,809 + 16682 mRNA_8314 0.33 0.5
919,083 + 16682 mRNA_8314 0.41 -0.4
919,664 - 16682 mRNA_8314 0.59 -0.4
919,807 - 16682 mRNA_8314 0.63 -0.0
920,120 + 16682 mRNA_8314 0.72 0.7
920,278 + 16682 mRNA_8314 0.77 0.0
920,430 + 16682 mRNA_8314 0.81 0.4
920,566 - 16682 mRNA_8314 0.86 1.3
921,186 + 1.3
921,490 + 1.8
921,619 - -0.1
921,631 - -1.1
921,643 - 2.2