Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8268

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635 mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809649 to 810847 16636 mRNA_8269: 16637 - Hypothetical Protein, at 810911 to 812187 16637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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809,285 - -0.2
809,286 - 0.1
809,290 - 0.0
809,302 - 1.3
809,342 + 0.6
809,427 - -0.9
809,430 - 0.0
809,474 + 1.4
809,476 - 0.6
810,061 - 16636 mRNA_8268 0.34 0.3
810,200 - 16636 mRNA_8268 0.46 -0.6
810,215 - 16636 mRNA_8268 0.47 -0.1
810,322 - 16636 mRNA_8268 0.56 1.1
810,338 + 16636 mRNA_8268 0.57 1.0
810,627 - 16636 mRNA_8268 0.82 -0.2
810,645 - 16636 mRNA_8268 0.83 0.8
810,650 - 16636 mRNA_8268 0.83 1.0
810,918 + 0.4
811,113 + 16637 mRNA_8269 0.16 0.3