Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8248

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760832 to 762310 16616 mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762768 to 764331 16617

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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759,835 - -0.7
759,861 - 0.2
759,862 + 0.4
759,866 - 0.0
759,874 - -0.5
759,882 + 1.8
759,883 - -1.0
759,887 - 0.3
759,889 - -0.4
759,890 + 2.0
759,899 + 0.1
759,899 + -0.4
759,899 - -1.5
759,907 + 0.2
759,935 - -0.7
760,054 + -0.3
760,055 + 0.3
760,070 + -0.0
760,072 + 1.2
760,179 - -0.5
760,318 - -0.2
760,329 + -0.5
760,357 - -0.9
760,490 + 0.1
760,784 - 0.8
760,798 - -0.8
760,800 + -0.0
760,804 - 1.1
760,808 + -0.3
760,813 - 1.1
760,817 - 2.5
760,937 + 0.8
760,948 - 2.3
761,111 + 16616 mRNA_8248 0.19 0.6
761,136 + 16616 mRNA_8248 0.21 1.2
761,262 - 16616 mRNA_8248 0.29 0.3
761,414 + 16616 mRNA_8248 0.39 1.8
761,729 + 16616 mRNA_8248 0.61 2.9
761,847 + 16616 mRNA_8248 0.69 1.9
762,562 - 0.3
762,850 + 1.4
762,873 + 0.9
762,994 - 16617 mRNA_8249 0.14 0.3
763,028 + 16617 mRNA_8249 0.17 0.1
763,047 - 16617 mRNA_8249 0.18 0.8