Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8092

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8091: 16459 - K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase, at 397502 to 399447 16459 mRNA_8092: 16460 - K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2, at 399883 to 401738 16460 mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402120 to 403069 16461

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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398,936 + 16459 mRNA_8091 0.74 -0.1
399,361 - -1.1
399,522 + 0.8
399,540 + -0.1
399,546 + 1.0
399,787 - -1.0
399,808 - -0.7
399,815 - -0.7
399,827 + 0.6
399,828 + 0.5
399,828 - -1.4
399,835 - -0.7
399,842 + 0.4
399,949 - -2.4
400,155 - 16460 mRNA_8092 0.15 -1.3
400,282 + 16460 mRNA_8092 0.21 -0.2
400,286 + 16460 mRNA_8092 0.22 -1.3
400,405 + 16460 mRNA_8092 0.28 -1.4
400,410 - 16460 mRNA_8092 0.28 -0.3
400,413 + 16460 mRNA_8092 0.29 -1.8
400,554 - 16460 mRNA_8092 0.36 -0.6
400,554 - 16460 mRNA_8092 0.36 -4.0
401,031 + 16460 mRNA_8092 0.62 -1.3
401,282 - 16460 mRNA_8092 0.75 -1.6
401,285 - 16460 mRNA_8092 0.76 -0.7
401,701 + -0.2
401,713 + -1.6
401,837 + -1.6
401,843 - -0.1
401,931 - -1.4
401,967 + -2.0
401,976 + -0.9
401,985 + -0.9
401,996 + -0.2
402,008 + 0.7
402,023 - -0.1
402,029 + 2.8
402,163 + -0.7
402,192 - -0.0
402,200 - -0.8
402,312 - 16461 mRNA_8093 0.20 -1.6
402,367 - 16461 mRNA_8093 0.26 0.6
402,448 - 16461 mRNA_8093 0.35 1.1
402,596 - 16461 mRNA_8093 0.50 -0.0