Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8073

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440 mRNA_8073: 16441 - Hypothetical Protein, at 361679 to 362906 16441 mRNA_8074: 16442 - Hypothetical Protein, at 363316 to 363918 16442

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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360,889 - 16440 mRNA_8072 0.77 0.8
361,166 + 1.2
361,170 - 0.1
361,183 - -0.7
361,192 + 0.2
361,195 - -1.1
361,309 + 0.3
361,310 - 0.5
361,329 + -0.1
361,329 + -0.5
361,337 - -0.5
361,342 + 0.0
361,459 + 1.0
361,466 - 0.4
361,477 - 1.9
361,481 + -1.1
361,482 - -0.7
361,486 - 1.1
361,489 - 0.6
361,493 - 0.1
361,494 + 1.1
361,496 - 0.3
361,501 + 0.1
361,503 - 0.7
361,606 + -0.6
361,613 - 0.7
361,615 - 0.0
361,616 - 0.7
361,616 - -0.8
361,627 - -0.2
361,633 - -0.5
361,639 - 0.1
361,641 + -0.0
361,641 + 0.5
361,643 + 0.4
361,652 - -0.3
361,655 + -0.3
361,749 - 0.4
361,760 - 0.6
361,764 - 0.6
361,767 - -0.3
361,779 - -0.1
361,788 + 2.2
361,796 - -1.0
361,801 - 1.7
361,802 + 16441 mRNA_8073 0.10 0.4
361,803 + 16441 mRNA_8073 0.10 0.0
361,804 + 16441 mRNA_8073 0.10 -0.1
361,929 - 16441 mRNA_8073 0.20 0.2
361,934 + 16441 mRNA_8073 0.21 -1.3
361,941 - 16441 mRNA_8073 0.21 -0.4
361,941 - 16441 mRNA_8073 0.21 -0.2
361,954 + 16441 mRNA_8073 0.22 -0.1
362,107 - 16441 mRNA_8073 0.35 -0.1
362,108 - 16441 mRNA_8073 0.35 2.2
362,394 + 16441 mRNA_8073 0.58 -0.2
362,396 - 16441 mRNA_8073 0.58 1.0
362,426 + 16441 mRNA_8073 0.61 -0.1
362,537 - 16441 mRNA_8073 0.70 -1.2
362,839 - -0.8
362,964 - 0.6
363,551 - 16442 mRNA_8074 0.39 -0.3
363,565 - 16442 mRNA_8074 0.41 0.5
363,569 + 16442 mRNA_8074 0.42 -0.8
363,691 - 16442 mRNA_8074 0.62 0.6
363,843 + 16442 mRNA_8074 0.87 -1.6