Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8046

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8045: 16413 - Hypothetical Protein, at 294906 to 295366 16413 mRNA_8046: 16414 - BLAST myosin tail domain protein [Rhizoctonia solani AG-3 R..., at 295669 to 297549 16414 mRNA_8047: 16415 - K08744 CRLS cardiolipin synthase (CMP-forming), at 297663 to 298822 16415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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294,800 - -0.8
294,931 - 0.2
295,095 + 16413 mRNA_8045 0.41 0.4
295,096 + 16413 mRNA_8045 0.41 -1.0
295,104 - 16413 mRNA_8045 0.43 -0.4
295,196 - 16413 mRNA_8045 0.63 0.5
295,226 - 16413 mRNA_8045 0.69 0.0
295,297 + 16413 mRNA_8045 0.85 0.2
295,366 - -0.3
295,525 - -0.9
295,703 - 0.5
295,835 + 0.4
296,414 + 16414 mRNA_8046 0.40 0.8
296,453 + 16414 mRNA_8046 0.42 -2.3
296,458 - 16414 mRNA_8046 0.42 -1.2
296,862 - 16414 mRNA_8046 0.63 -1.8
297,011 - 16414 mRNA_8046 0.71 -1.0
297,100 - 16414 mRNA_8046 0.76 1.0
297,314 - 16414 mRNA_8046 0.87 0.3
297,319 - 16414 mRNA_8046 0.88 -0.0
297,323 + 16414 mRNA_8046 0.88 -0.1
297,326 + 16414 mRNA_8046 0.88 0.1
297,442 - 0.7
297,445 + -0.5
297,475 - 1.0
297,616 + -0.2
297,624 - 0.1
297,624 + 1.5