Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8006

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8006: 16374 - Hypothetical Protein, at 197115 to 197847 16374 mRNA_8007: 16375 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 198335 to 201051 16375

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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196,182 + -0.0
196,262 - -0.0
196,306 - 2.3
196,747 - 1.0
196,755 - 0.2
197,273 - 16374 mRNA_8006 0.22 -0.6
197,380 - 16374 mRNA_8006 0.36 -1.6
197,384 - 16374 mRNA_8006 0.37 0.3
197,512 - 16374 mRNA_8006 0.54 -0.3
197,544 + 16374 mRNA_8006 0.59 -0.4
197,556 - 16374 mRNA_8006 0.60 0.1
197,655 + 16374 mRNA_8006 0.74 1.0
197,846 + 1.8
197,971 - 0.5
197,974 - 0.1
197,976 - 0.3
197,986 + -0.0
197,986 + 0.4
197,992 - 0.3
198,003 - -0.1
198,013 + 0.3
198,122 + -1.9
198,126 - -0.3
198,186 + -0.3
198,825 + 16375 mRNA_8007 0.18 1.2