Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8005

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8004: 16372 - K06648 SWI6 regulatory protein SWI6, at 191300 to 193753 16372 mRNA_8005: 16373 - BLAST alpha- -mannosyltransferase alg11p [Moniliophthor..., at 194577 to 195838 16373

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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193,620 - 0.3
193,818 - 1.5
193,929 - -1.2
193,996 + -0.8
194,080 - -0.4
194,161 + 1.1
194,366 + 1.7
194,476 + -0.8
194,505 + 0.0
194,506 + 0.8
194,631 + 0.1
194,644 - 0.0
194,804 + 16373 mRNA_8005 0.18 0.6
194,809 - 16373 mRNA_8005 0.18 1.1
194,816 + 16373 mRNA_8005 0.19 -1.2
194,959 - 16373 mRNA_8005 0.30 -0.9
195,238 - 16373 mRNA_8005 0.52 -0.7
195,699 + 16373 mRNA_8005 0.89 -0.9
195,709 + 16373 mRNA_8005 0.90 -0.1
195,710 + 16373 mRNA_8005 0.90 0.3
195,722 + 0.2
195,878 + -1.1
196,004 + 0.2
196,024 + 0.2
196,182 + -0.0
196,262 - -0.0
196,306 - 2.3
196,747 - 1.0
196,755 - 0.2