Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7997

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7996: 16364 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 174133 to 175085 16364 mRNA_7997: 16365 - Hypothetical Protein, at 175360 to 176282 16365 mRNA_7998: 16366 - KOG3156 Uncharacterized membrane protein, at 176627 to 177709 16366

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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174,502 + 16364 mRNA_7996 0.39 -0.3
174,528 + 16364 mRNA_7996 0.41 1.5
174,584 + 16364 mRNA_7996 0.47 0.1
174,675 - 16364 mRNA_7996 0.57 0.7
174,982 + 16364 mRNA_7996 0.89 -0.6
174,989 + 16364 mRNA_7996 0.90 0.3
175,030 + 1.2
175,118 - 0.4
175,122 - 0.6
175,130 + 0.3
175,136 - 0.8
175,424 - 0.1
175,584 - 16365 mRNA_7997 0.24 -0.1
175,597 + 16365 mRNA_7997 0.26 -1.0
175,688 + 16365 mRNA_7997 0.36 1.2
175,696 + 16365 mRNA_7997 0.36 0.7
175,696 + 16365 mRNA_7997 0.36 1.1
175,865 - 16365 mRNA_7997 0.55 1.5
176,074 - 16365 mRNA_7997 0.77 1.5
176,170 + 16365 mRNA_7997 0.88 0.3
176,223 + -0.6
176,312 - -0.1
176,903 + 16366 mRNA_7998 0.25 0.6