Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7973

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7972: 16340 - Hypothetical Protein, at 120428 to 122131 16340 mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122692 to 128410 16341 mRNA_7974: 16342 - Hypothetical Protein, at 128673 to 129137 16342

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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121,948 - 16340 mRNA_7972 0.89 0.8
121,949 - 16340 mRNA_7972 0.89 0.1
122,110 - -1.7
122,152 + -0.3
122,172 - -0.8
122,408 + 1.2
122,503 - -1.1
122,524 - -0.5
122,702 + -0.2
122,714 - 0.5
123,107 - 1.6
123,383 - 16341 mRNA_7973 0.12 -0.3
123,406 - 16341 mRNA_7973 0.12 -1.2
123,427 - 16341 mRNA_7973 0.13 -2.3
123,427 + 16341 mRNA_7973 0.13 -1.1
123,607 + 16341 mRNA_7973 0.16 0.0
123,771 + 16341 mRNA_7973 0.19 1.2
123,974 - 16341 mRNA_7973 0.22 -0.6
123,999 + 16341 mRNA_7973 0.23 -1.8
124,077 + 16341 mRNA_7973 0.24 -0.8
124,294 - 16341 mRNA_7973 0.28 -1.3
124,411 - 16341 mRNA_7973 0.30 -0.9
124,690 - 16341 mRNA_7973 0.35 -3.2
124,744 - 16341 mRNA_7973 0.36 0.1
124,774 + 16341 mRNA_7973 0.36 -0.4
124,878 + 16341 mRNA_7973 0.38 -1.2
124,962 + 16341 mRNA_7973 0.40 -1.2
125,189 - 16341 mRNA_7973 0.44 0.3
125,217 + 16341 mRNA_7973 0.44 0.0
125,415 - 16341 mRNA_7973 0.48 -1.8
125,425 + 16341 mRNA_7973 0.48 -0.2
125,425 - 16341 mRNA_7973 0.48 0.1
125,943 - 16341 mRNA_7973 0.57 -0.5
126,330 + 16341 mRNA_7973 0.64 -0.3
126,371 - 16341 mRNA_7973 0.64 -0.5
127,016 - 16341 mRNA_7973 0.76 -0.3
127,157 - 16341 mRNA_7973 0.78 -0.9
128,185 - -2.0
128,281 - -2.3
128,321 + -1.6
128,321 + -1.3
128,574 - 0.8
128,574 + 0.6
128,575 + 0.1
128,575 + -0.5
128,575 + 0.8
128,581 + 1.0
128,587 - 1.5
128,598 + 1.3
128,598 - 0.2
128,603 + 0.0
128,603 + 0.9
128,609 + -1.5
128,609 + 0.1
128,614 + 0.1
128,714 + -0.2
128,722 - 16342 mRNA_7974 0.11 2.0
128,872 - 16342 mRNA_7974 0.43 -0.1
128,877 + 16342 mRNA_7974 0.44 0.7
128,897 - 16342 mRNA_7974 0.48 1.8
129,203 + 0.1
129,230 - -1.5
129,307 - 0.2
129,309 + 0.1
129,309 + -2.0
129,312 - 1.1
129,320 - 1.1
129,338 + 1.0