Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7960

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7959: 16327 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 101739 to 102560 16327 mRNA_7960: 16328 - SUPERFAMILY--SSF144232, at 102805 to 103919 16328 mRNA_7961: 16329 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 104119 to 104997 16329

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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101,834 + 16327 mRNA_7959 0.12 -0.5
101,905 + 16327 mRNA_7959 0.20 1.7
101,907 - 16327 mRNA_7959 0.20 0.7
102,169 - 16327 mRNA_7959 0.52 -0.2
102,349 - 16327 mRNA_7959 0.74 -0.7
102,457 + 16327 mRNA_7959 0.87 1.0
102,497 - 0.6
102,660 - 0.1
102,661 + -2.4
102,739 + 1.4
102,745 + 2.9
102,748 - -0.4
102,748 - 0.4
102,752 + 0.1
102,776 + 0.8
102,956 + 16328 mRNA_7960 0.14 0.6
103,021 - 16328 mRNA_7960 0.19 -0.8
103,060 + 16328 mRNA_7960 0.23 -0.4
103,094 + 16328 mRNA_7960 0.26 0.0
103,249 + 16328 mRNA_7960 0.40 0.0
103,249 + 16328 mRNA_7960 0.40 0.5
103,297 + 16328 mRNA_7960 0.44 0.7
103,300 + 16328 mRNA_7960 0.44 0.3
103,303 + 16328 mRNA_7960 0.45 -0.6
103,326 - 16328 mRNA_7960 0.47 1.2
103,759 + 16328 mRNA_7960 0.86 1.0
103,808 + 1.7
103,816 - 0.3
103,945 - -0.3
103,951 + 1.0
103,951 + -1.4
103,976 + -0.8
104,044 + -0.4
104,204 - 0.6
104,257 + 16329 mRNA_7961 0.16 -0.3
104,537 + 16329 mRNA_7961 0.48 -0.9
104,710 + 16329 mRNA_7961 0.67 -0.4
104,817 - 16329 mRNA_7961 0.79 1.3
104,839 - 16329 mRNA_7961 0.82 0.2
104,902 + 16329 mRNA_7961 0.89 1.2
104,918 - 0.8