Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7959

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7958: 16326 - Hypothetical Protein, at 100793 to 101343 16326 mRNA_7959: 16327 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 101739 to 102560 16327 mRNA_7960: 16328 - SUPERFAMILY--SSF144232, at 102805 to 103919 16328

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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100,759 - -0.3
101,390 - -2.5
101,438 - 1.8
101,548 + -0.2
101,595 - -0.3
101,697 + 1.3
101,699 + 0.6
101,707 + 2.6
101,834 + 16327 mRNA_7959 0.12 -0.5
101,905 + 16327 mRNA_7959 0.20 1.7
101,907 - 16327 mRNA_7959 0.20 0.7
102,169 - 16327 mRNA_7959 0.52 -0.2
102,349 - 16327 mRNA_7959 0.74 -0.7
102,457 + 16327 mRNA_7959 0.87 1.0
102,497 - 0.6
102,660 - 0.1
102,661 + -2.4
102,739 + 1.4
102,745 + 2.9
102,748 - -0.4
102,748 - 0.4
102,752 + 0.1
102,776 + 0.8
102,956 + 16328 mRNA_7960 0.14 0.6
103,021 - 16328 mRNA_7960 0.19 -0.8
103,060 + 16328 mRNA_7960 0.23 -0.4
103,094 + 16328 mRNA_7960 0.26 0.0
103,249 + 16328 mRNA_7960 0.40 0.0
103,249 + 16328 mRNA_7960 0.40 0.5
103,297 + 16328 mRNA_7960 0.44 0.7
103,300 + 16328 mRNA_7960 0.44 0.3
103,303 + 16328 mRNA_7960 0.45 -0.6
103,326 - 16328 mRNA_7960 0.47 1.2