Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7952

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79808 to 82314 16319 mRNA_7952: 16320 - KOG0627 Heat shock transcription factor, at 82566 to 84687 16320

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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81,693 + 16319 mRNA_7951 0.75 0.7
81,831 + 16319 mRNA_7951 0.81 1.0
82,009 + 16319 mRNA_7951 0.88 1.1
82,091 + 0.3
82,124 + -0.3
82,124 + -0.8
82,228 + 0.3
82,317 - 1.7
82,547 + 0.3
82,592 - 1.2
82,721 - -1.0
83,236 - 16320 mRNA_7952 0.32 -0.2
83,237 + 16320 mRNA_7952 0.32 2.8
83,416 + 16320 mRNA_7952 0.40 1.4
83,582 + 16320 mRNA_7952 0.48 1.5
83,583 + 16320 mRNA_7952 0.48 -1.5
83,596 + 16320 mRNA_7952 0.49 -0.2
83,713 - 16320 mRNA_7952 0.54 0.7
83,836 + 16320 mRNA_7952 0.60 -0.1
83,892 + 16320 mRNA_7952 0.62 -1.2
84,150 - 16320 mRNA_7952 0.75 -1.1
84,151 + 16320 mRNA_7952 0.75 1.2
84,324 - 16320 mRNA_7952 0.83 0.6
84,449 + 16320 mRNA_7952 0.89 0.5
84,595 + -0.5
84,860 - 0.1
85,155 - 0.2
85,172 + 0.6
85,284 + 0.2
85,297 + -0.4
85,466 + -2.0
85,614 - 1.0
85,619 - -0.4
85,627 + 0.3
85,652 + 1.8
85,656 + 0.2