Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7948

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73248 to 74114 16315 mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74444 to 75195 16316 mRNA_7949: 16317 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 75609 to 76482 16317

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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73,529 - 16315 mRNA_7947 0.32 0.9
73,530 + 16315 mRNA_7947 0.33 -0.7
73,537 + 16315 mRNA_7947 0.33 2.2
73,779 - 16315 mRNA_7947 0.61 -0.2
73,805 + 16315 mRNA_7947 0.64 0.1
74,097 - -0.2
74,108 + -0.0
74,119 + 0.1
74,345 - -0.1
74,350 + 1.2
74,359 - 0.5
74,363 - -0.1
74,366 + 0.4
74,380 + -0.3
74,500 - -1.1
74,504 + 0.8
74,570 - 16316 mRNA_7948 0.17 1.2
74,594 - 16316 mRNA_7948 0.20 1.6
74,934 + 16316 mRNA_7948 0.65 -1.6
75,131 - 0.4
75,532 + 1.7
75,573 - -0.4
75,573 - 0.8
75,581 - -0.1
75,591 + 1.8
75,595 + 0.6
75,601 - 0.2
75,601 - -0.6
75,836 + 16317 mRNA_7949 0.26 1.2
75,850 - 16317 mRNA_7949 0.28 1.2
75,866 + 16317 mRNA_7949 0.29 -0.0
75,959 - 16317 mRNA_7949 0.40 0.3
76,096 - 16317 mRNA_7949 0.56 0.1
76,104 + 16317 mRNA_7949 0.57 -0.6
76,182 + 16317 mRNA_7949 0.66 -0.2