Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7847

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7847: 16215 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1205985 to 1207828 16215 mRNA_7848: 16216 - BLAST LYR MOTIF-CONTAINING PROTEIN 7 [Ceraceosorus bombacis], at 1208435 to 1209073 16216

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,205,063 - 0.4
1,205,072 - 0.6
1,205,096 - -1.4
1,205,102 + 1.2
1,205,105 - 0.1
1,205,109 + -0.5
1,205,114 + -0.4
1,205,122 - 0.6
1,205,140 - 0.8
1,205,144 + 0.8
1,205,145 + -0.4
1,205,168 - 1.0
1,205,174 - -0.3
1,205,189 - 0.3
1,205,192 + 0.6
1,205,198 - 0.9
1,205,204 - 0.3
1,205,208 - -0.4
1,205,210 - 1.2
1,205,211 + 1.6
1,205,215 - -0.7
1,205,222 + -0.6
1,205,326 + 0.7
1,205,364 + -0.2
1,205,367 - -2.0
1,205,384 - -1.1
1,205,386 + -1.2
1,205,391 + -0.0
1,205,405 - -0.6
1,205,406 - -0.3
1,205,412 - 0.3
1,205,415 - -1.3
1,205,416 + 1.5
1,205,417 + 0.4
1,205,451 - -2.7
1,205,565 - -0.8
1,205,573 + -0.2
1,205,700 - 0.1
1,205,830 + 0.9
1,205,837 - 1.1
1,205,846 + 0.1
1,205,849 - 0.8
1,205,862 + -0.9
1,205,862 + -0.1
1,205,995 + 0.0
1,205,997 - 0.7
1,206,153 + 0.4
1,206,413 - 16215 mRNA_7847 0.23 0.4
1,206,511 - 16215 mRNA_7847 0.29 0.5
1,206,563 + 16215 mRNA_7847 0.31 1.0
1,206,868 - 16215 mRNA_7847 0.48 1.3
1,207,414 + 16215 mRNA_7847 0.77 -2.1
1,207,526 + 16215 mRNA_7847 0.84 1.1
1,208,146 - -0.1
1,208,175 + 0.1
1,208,587 - 16216 mRNA_7848 0.24 1.7