Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7725

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092 mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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933,038 - 16092 mRNA_7724 0.70 0.1
933,068 - 16092 mRNA_7724 0.72 -0.5
933,307 - 16092 mRNA_7724 0.90 -0.1
933,356 - -0.8
933,363 + 0.9
933,369 + -0.4
933,375 + -0.8
933,489 - 1.1
933,505 - 0.1
933,512 + -0.5
933,512 - 0.3
933,521 + 1.2
933,523 + 1.3
933,531 - 0.3
933,536 + 0.4
933,649 + 0.3
933,673 - -0.2
933,686 + 1.6
933,704 + 2.3
933,863 + -2.0
934,103 + -0.6
934,743 - 16093 mRNA_7725 0.35 -1.5
934,920 + 16093 mRNA_7725 0.42 -0.5
935,081 - 16093 mRNA_7725 0.49 0.1
935,093 + 16093 mRNA_7725 0.49 0.0
935,363 + 16093 mRNA_7725 0.60 1.6
935,409 + 16093 mRNA_7725 0.62 0.3
935,889 - 16093 mRNA_7725 0.81 0.2
935,932 - 16093 mRNA_7725 0.83 0.1
935,936 + 16093 mRNA_7725 0.83 0.1
935,947 + 16093 mRNA_7725 0.83 0.2
936,278 + 1.4
936,285 + 2.5
936,345 + 3.1
936,665 - -0.3
936,669 + -0.7
936,675 - -1.1
936,718 + -0.1
936,718 - 0.1
936,791 + 1.2
936,793 - 0.9
936,795 - 2.2
936,833 - 1.6
936,834 + -1.3
936,948 - 0.1
936,966 - 1.2
936,978 - 2.0
936,987 - -0.3
937,082 + 0.0
937,108 - 1.4
937,111 - 1.1
937,122 - 1.2
937,153 - -0.4
937,257 - 0.3
937,274 - 0.8
937,291 + 1.3
937,312 - -0.4