Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7678

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7677: 16045 - Hypothetical Protein, at 820040 to 821034 16045 mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821386 to 822078 16046 mRNA_7679: 16047 - K12861 BCAS2 pre-mRNA-splicing factor SPF27, at 822230 to 823111 16047

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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820,471 - 16045 mRNA_7677 0.43 -1.3
820,498 + 16045 mRNA_7677 0.46 -0.6
820,616 + 16045 mRNA_7677 0.58 -0.6
820,667 + 16045 mRNA_7677 0.63 0.5
820,668 - 16045 mRNA_7677 0.63 -1.0
820,776 - 16045 mRNA_7677 0.74 0.6
820,787 + 16045 mRNA_7677 0.75 -0.6
821,065 - -0.6
821,071 - -0.4
821,133 - 1.7
821,219 - 1.7
821,351 + 1.0
821,724 + 16046 mRNA_7678 0.49 0.1
821,824 + 16046 mRNA_7678 0.63 2.1
821,827 + 16046 mRNA_7678 0.64 0.6
821,974 + 16046 mRNA_7678 0.85 0.0
822,093 - 0.1
822,869 - 16047 mRNA_7679 0.72 -0.6
823,043 - 0.7