Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7663

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788706 to 790925 16030 mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791381 to 793587 16031

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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790,402 - 16030 mRNA_7662 0.76 0.1
790,975 - 0.9
790,988 - -0.3
790,990 + 1.5
790,993 - 0.4
790,995 - 0.8
791,015 - -0.2
791,036 + -0.9
791,092 - 1.4
791,131 - -1.2
791,133 + 0.7
791,151 + 0.4
791,156 + 0.2
791,193 - -0.5
791,199 - -0.0
791,212 + -0.8
791,286 + -0.5
791,290 - -1.3
791,295 + -0.2
791,295 + 0.2
791,312 + 1.9
791,315 - 0.1
791,335 - -1.3
791,339 - -1.3
791,431 + 0.1
791,444 + -0.4
791,446 + -0.1
791,447 - -0.2
791,475 + -1.2
791,760 + 16031 mRNA_7663 0.17 -0.9
791,851 + 16031 mRNA_7663 0.21 1.1
791,990 - 16031 mRNA_7663 0.28 -2.1
792,109 + 16031 mRNA_7663 0.33 3.0
792,184 + 16031 mRNA_7663 0.36 1.5
792,554 + 16031 mRNA_7663 0.53 -0.3
792,903 - 16031 mRNA_7663 0.69 0.5
793,070 + 16031 mRNA_7663 0.77 -0.7
793,071 - 16031 mRNA_7663 0.77 0.2
793,126 - 16031 mRNA_7663 0.79 -0.2
793,222 + 16031 mRNA_7663 0.83 0.8
793,297 - 16031 mRNA_7663 0.87 0.3
793,402 - 1.9
793,452 + 1.2
793,610 + 1.0
793,657 - -0.5
793,690 - 0.2
793,709 - 0.1
793,759 - 2.9
793,769 + 0.2
793,774 - -0.3
793,787 - 0.2
793,795 - -1.0
793,832 + 1.1
793,917 + 1.0
793,919 - -0.4
793,929 + 1.4
793,930 - 0.4
793,936 + 1.7
793,936 - 0.6
793,939 + -0.8
793,940 + -0.6
793,941 + 0.1
793,941 + -0.5
793,948 - 2.1
793,955 - 1.4
793,957 - 0.1
793,960 + 1.6
793,963 - -1.6
793,968 - 0.5
793,977 - -0.6
793,994 + -0.1
794,005 + 1.4
794,006 - 2.3
794,008 - 1.1
794,009 + -1.2
794,034 + -0.4
794,035 + 1.4
794,037 + 1.7
794,053 + -0.3
794,058 + 1.6
794,071 - 1.5
794,074 + -1.6
794,077 - 0.4
794,078 + 1.0
794,081 + -0.0
794,082 + 0.1
794,093 - 1.7
794,096 - -1.2
794,098 - 0.2
794,104 + 0.8
794,105 - -0.2
794,115 + 0.6
794,117 + 2.8
794,122 - -1.6
794,122 - 0.0
794,123 - -2.0
794,127 - -0.4
794,130 + -0.8
794,134 + 0.3
794,135 - 0.1
794,136 - 0.2
794,138 + -0.7
794,141 + -0.1
794,152 - 1.0
794,155 + 1.7
794,161 + -0.4
794,162 - 0.2
794,164 - -0.1
794,164 - 1.5
794,165 - 0.3
794,167 - 0.5
794,168 + -0.8
794,174 + 0.3
794,175 + 3.3
794,177 - -0.4
794,177 + 0.7
794,179 - 0.4
794,180 - 1.3
794,180 - -0.3
794,182 + 0.0
794,184 + 0.1
794,185 + 0.3
794,185 - -0.3
794,186 + 0.1
794,187 - 0.2
794,187 - -0.1
794,202 - -0.1
794,203 + 0.8
794,203 + 0.7
794,203 - -0.9
794,204 + 0.7
794,206 + 0.7
794,209 + 0.5
794,210 - 0.8
794,223 - -1.0
794,227 - 1.2
794,227 + -0.1
794,229 + 0.4
794,230 - -0.6
794,233 + -0.5
794,233 - -0.4
794,236 - 1.2
794,237 + -0.1
794,238 + -0.1
794,240 - -0.4
794,245 - 1.5
794,245 - 0.1
794,248 + 2.8
794,248 - 2.9
794,252 - -0.3
794,253 - -0.2
794,259 - -0.3
794,259 + -0.7
794,261 + 2.1
794,262 + 0.8
794,265 + 0.9
794,267 - 0.3
794,278 - -1.0
794,281 - 0.4
794,283 + 0.4
794,292 + -1.5
794,372 + -0.6
794,396 + 1.3
794,418 + 0.6
794,422 + -3.0
794,427 + 0.9
794,447 + -0.2
794,453 - -0.8
794,459 + -0.3
794,496 - 0.9
794,517 - 1.4
794,521 - 2.1
794,525 + 0.2
794,529 + -0.3
794,542 - 0.1
794,555 + -0.0
794,556 + 1.3
794,558 + -0.0
794,561 - 0.3
794,563 + 0.1
794,568 + 0.3
794,575 + 0.4
794,576 - 0.3
794,578 - -0.3