Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7633

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7632: 16000 - KOG0383 Predicted helicase, at 722943 to 730457 16000 mRNA_7633: 16001 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 730629 to 733694 16001 mRNA_7634: 16002 - HMMPfam-Protein of unknown function (DUF1264)-PF06884, at 734155 to 735362 16002

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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729,893 + 2.7
730,271 - 1.5
730,580 + -2.0
730,649 + 2.3
730,663 - 2.0
730,675 - 0.2
730,949 + 16001 mRNA_7633 0.10 1.3
731,011 + 16001 mRNA_7633 0.12 -0.0
731,035 + 16001 mRNA_7633 0.13 -0.2
731,132 - 16001 mRNA_7633 0.16 0.7
731,767 - 16001 mRNA_7633 0.37 -0.8
731,881 + 16001 mRNA_7633 0.41 0.5
732,187 - 16001 mRNA_7633 0.51 1.8
732,426 - 16001 mRNA_7633 0.59 -0.6
732,592 + 16001 mRNA_7633 0.64 0.4
733,067 + 16001 mRNA_7633 0.80 1.2
733,300 - 16001 mRNA_7633 0.87 1.9
733,322 - 16001 mRNA_7633 0.88 -0.5
733,669 + 0.6
733,864 - -0.3
733,949 + 0.1
733,951 + 1.1
734,087 + -0.2
734,091 + -0.1
734,105 - 0.9
734,122 + -0.2
734,140 + 1.5