Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7626

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7625: 15993 - HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503, at 708151 to 709093 15993 mRNA_7626: 15994 - K00273 DAO, aao D-amino-acid oxidase, at 709563 to 711029 15994 mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711202 to 712775 15995

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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708,581 + 15993 mRNA_7625 0.46 0.3
708,689 + 15993 mRNA_7625 0.57 0.2
708,757 - 15993 mRNA_7625 0.64 1.1
708,849 - 15993 mRNA_7625 0.74 0.8
708,853 - 15993 mRNA_7625 0.74 0.1
708,869 - 15993 mRNA_7625 0.76 2.4
708,883 - 15993 mRNA_7625 0.78 1.0
708,895 + 15993 mRNA_7625 0.79 2.4
708,898 + 15993 mRNA_7625 0.79 0.2
709,030 - 1.1
709,140 - -0.1
709,146 - -0.2
709,153 - -0.5
709,167 - -1.4
709,167 + 0.2
709,178 - 1.0
709,191 + 0.9
709,203 + 1.8
709,204 + 1.3
709,206 + 1.2
709,223 + 1.8
709,232 - 0.9
709,235 - 0.0
709,235 - 2.0
709,236 + 0.9
709,238 + 1.5
709,238 + -1.3
709,240 + 0.7
709,242 + 1.2
709,249 - 0.4
709,257 - -0.0
709,319 - -0.1
709,319 + 0.5
709,325 - -0.4
709,343 + 0.7
709,473 + -0.3
709,489 + -0.0
709,491 - 0.3
709,492 - 0.1
709,492 - 1.5
709,498 + 2.5
709,801 - 15994 mRNA_7626 0.16 -0.3
710,103 - 15994 mRNA_7626 0.37 0.6
710,380 + 15994 mRNA_7626 0.56 1.6
710,380 - 15994 mRNA_7626 0.56 0.3
710,387 - 15994 mRNA_7626 0.56 2.5
710,505 - 15994 mRNA_7626 0.64 0.5
710,689 - 15994 mRNA_7626 0.77 0.5
710,913 - 0.6
710,969 + 1.2
710,987 - -0.7
711,001 + 0.8
711,010 + 2.4
711,075 - -2.1
711,084 - 1.1
711,084 - -0.2
711,087 - -0.4
711,098 + 1.6
711,144 - 0.2
711,193 - -1.1
711,242 - -0.4
711,303 + -0.5
711,424 + 15995 mRNA_7627 0.14 -0.1
711,429 + 15995 mRNA_7627 0.14 -0.4
711,664 - 15995 mRNA_7627 0.29 -0.4