Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7596

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7594: 15962 - K00106 XDH xanthine dehydrogenase/oxidase, at 640991 to 646168 15962 mRNA_7595: 15963 - K02151 ATPeV1F, ATP6S14 V-type H+-transporting ATPase subunit F, at 646421 to 647106 15963 mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647163 to 648088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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646,267 - -0.4
646,267 - 0.5
646,273 + 1.4
646,390 + -0.0
647,267 - 15964 mRNA_7596 0.11 0.2
647,280 + 15964 mRNA_7596 0.13 -0.1
647,281 + 15964 mRNA_7596 0.13 0.4
647,281 - 15964 mRNA_7596 0.13 1.6
647,287 + 15964 mRNA_7596 0.13 -0.0
647,441 - 15964 mRNA_7596 0.30 -0.1
647,733 + 15964 mRNA_7596 0.62 0.2
647,767 + 15964 mRNA_7596 0.65 0.1
648,019 + -0.5
648,022 - -0.1
648,036 + -0.1
648,036 + 0.5
648,297 + -0.7
648,324 - 0.2
648,460 + 15965 mRNA_7597 0.14 -0.5
648,588 - 15965 mRNA_7597 0.23 0.6
648,883 - 15965 mRNA_7597 0.44 1.1