Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7534

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507910 to 511338 15901 mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511662 to 512740 15902 mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512882 to 513517 15903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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510,822 - 15901 mRNA_7533 0.85 0.9
510,977 - 15901 mRNA_7533 0.89 -0.5
511,246 - 2.0
511,260 - 0.1
511,396 + -0.1
511,415 + -0.4
511,425 + 0.7
511,550 - -0.6
511,566 + 0.8
511,708 + -0.0
511,845 - 15902 mRNA_7534 0.17 -0.2
511,849 + 15902 mRNA_7534 0.17 -0.5
511,850 - 15902 mRNA_7534 0.17 1.0
512,001 + 15902 mRNA_7534 0.31 0.5
512,013 - 15902 mRNA_7534 0.33 0.8
512,013 + 15902 mRNA_7534 0.33 1.8
512,128 - 15902 mRNA_7534 0.43 0.5
512,255 + 15902 mRNA_7534 0.55 0.6
512,295 - 15902 mRNA_7534 0.59 -1.2
512,433 + 15902 mRNA_7534 0.71 1.7
512,697 - 0.3
512,720 - 0.4
512,721 + -0.7
512,735 + 0.2
512,738 - -0.5
512,739 + -0.1
513,583 - 0.5
513,597 + 0.9
513,599 - -0.3
513,728 + 1.1