Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7498

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7497: 15865 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 430660 to 431671 15865 mRNA_7498: 15866 - Hypothetical Protein, at 431896 to 432524 15866

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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430,983 + 15865 mRNA_7497 0.32 -0.7
431,021 + 15865 mRNA_7497 0.36 1.7
431,028 + 15865 mRNA_7497 0.36 1.0
431,159 + 15865 mRNA_7497 0.49 -1.0
431,160 + 15865 mRNA_7497 0.49 -0.0
431,300 + 15865 mRNA_7497 0.63 0.1
431,586 + 0.3
431,587 + 1.0
431,720 - -0.1
431,736 - -0.0
431,744 + 1.2
431,749 + 0.6
431,818 - 0.6
431,945 - -0.4
431,953 + -0.7
432,100 + 15866 mRNA_7498 0.32 0.2
432,103 - 15866 mRNA_7498 0.33 -0.9
432,238 - 15866 mRNA_7498 0.54 0.9
432,244 - 15866 mRNA_7498 0.55 0.9
432,382 - 15866 mRNA_7498 0.77 -0.5
432,396 - 15866 mRNA_7498 0.79 0.1
432,674 - 0.8
432,679 + -1.1
432,809 - 0.3
432,810 - -0.8
433,113 + 1.0
433,220 - 0.9