Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7462

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7461: 15829 - K08964 mtnB methylthioribulose-1-phosphate dehydratase, at 332906 to 334515 15829 mRNA_7462: 15830 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 334859 to 336377 15830 mRNA_7463: 15831 - Hypothetical Protein, at 337178 to 338673 15831

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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334,195 - 15829 mRNA_7461 0.80 -1.1
334,323 - 15829 mRNA_7461 0.88 2.2
334,501 - 0.9
334,605 + 2.4
334,605 + 0.2
334,608 + -0.8
334,624 + -0.4
334,758 - -0.0
334,765 + -1.6
334,771 - 0.5
335,364 + 15830 mRNA_7462 0.33 0.1
335,382 + 15830 mRNA_7462 0.34 0.5
335,503 - 15830 mRNA_7462 0.42 -0.9
335,504 + 15830 mRNA_7462 0.42 -0.1
335,509 + 15830 mRNA_7462 0.43 0.6
335,797 - 15830 mRNA_7462 0.62 0.5
335,801 - 15830 mRNA_7462 0.62 1.2
335,950 - 15830 mRNA_7462 0.72 0.2
336,094 - 15830 mRNA_7462 0.81 0.5
336,103 + 15830 mRNA_7462 0.82 0.1
336,241 - 0.1
336,506 - -0.4
336,523 + -0.3
336,972 - 0.4
336,978 - 0.8
336,982 + 1.6
336,983 + 0.2
336,994 + -0.2
336,994 + 1.3
336,994 + -0.6
337,004 - 0.7
337,007 + 0.1
337,011 + -0.0
337,020 + 0.6
337,048 + -0.8
337,151 - -0.1
337,230 + -2.3