Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7383

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7382: 15750 - Hypothetical Protein, at 147562 to 148955 15750 mRNA_7383: 15751 - K19355 MAN mannan endo-1,4-beta-mannosidase, at 149650 to 152306 15751 mRNA_7384: 15752 - K11128 GAR1, NOLA1 H/ACA ribonucleoprotein complex subunit 1, at 152913 to 154132 15752

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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148,784 + 15750 mRNA_7382 0.88 -0.3
148,784 + 15750 mRNA_7382 0.88 0.1
148,808 - 15750 mRNA_7382 0.89 0.7
148,897 - 1.5
148,908 + 0.7
148,909 + 0.1
148,912 - -0.0
148,918 + 2.6
148,919 - -0.4
148,940 + 0.5
148,974 - 0.2
149,004 + -0.3
149,012 - 0.6
149,023 + 1.1
149,031 + -0.5
149,205 + -0.3
149,241 - 1.7
149,248 - 0.5
149,275 + 0.6
149,353 + 0.2
149,359 + 0.9
149,377 + 1.8
149,389 + -0.4
149,546 + 0.5
149,649 - -0.7
149,652 - 1.4
149,652 - -0.1
149,653 + -2.0
149,655 + -1.1
150,020 - 15751 mRNA_7383 0.14 -0.7
150,389 + 15751 mRNA_7383 0.28 -1.0
150,540 - 15751 mRNA_7383 0.33 0.6
150,546 - 15751 mRNA_7383 0.34 0.9
150,831 + 15751 mRNA_7383 0.44 2.2
151,103 + 15751 mRNA_7383 0.55 -0.7
151,142 - 15751 mRNA_7383 0.56 -1.3
151,362 + 15751 mRNA_7383 0.64 0.1
151,713 - 15751 mRNA_7383 0.78 -0.0
152,272 - -0.5
152,277 + -0.6
152,289 - 0.3
152,415 + 3.0
152,418 - 0.6
152,422 + 2.3
152,561 + 0.7
152,588 + -0.4
152,595 - 1.0
152,704 + 0.1
152,720 - 1.0
152,723 - 0.4
152,737 - -0.4
152,751 + -1.1
152,870 - 0.8
153,020 + -0.5