Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7370

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738 mRNA_7371: 15739 - Hypothetical Protein, at 113683 to 115680 15739

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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111,886 - 15737 mRNA_7369 0.63 2.0
112,057 - 15737 mRNA_7369 0.78 1.8
112,217 - -0.5
112,221 + -0.8
112,231 + 0.4
112,232 - -0.9
112,234 + -0.4
112,243 + 1.6
112,359 + -1.2
112,364 - 0.3
112,368 + 0.4
112,370 + 0.1
112,374 + -0.2
112,382 + 0.1
112,394 + 1.0
112,399 + 1.8
113,297 - 15738 mRNA_7370 0.78 -0.1
113,415 - 0.5
113,851 - 3.0
113,987 + 15739 mRNA_7371 0.15 1.7
114,100 - 15739 mRNA_7371 0.21 0.3
114,144 + 15739 mRNA_7371 0.23 0.5
114,287 + 15739 mRNA_7371 0.30 0.2