Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7223

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1165712 to 1166653 15590 mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1166927 to 1171458 15591 mRNA_7224: 15592 - K15564 CTK2 CTD kinase subunit beta, at 1171595 to 1173622 15592

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,166,001 + 15590 mRNA_7222 0.31 0.0
1,166,087 - 15590 mRNA_7222 0.40 -0.7
1,166,259 - 15590 mRNA_7222 0.58 2.5
1,166,579 - -0.0
1,167,200 - 0.6
1,167,321 + 1.2
1,167,626 - 15591 mRNA_7223 0.15 -0.4
1,168,018 - 15591 mRNA_7223 0.24 -1.0
1,168,346 - 15591 mRNA_7223 0.31 -1.1
1,168,735 - 15591 mRNA_7223 0.40 -1.2
1,169,064 + 15591 mRNA_7223 0.47 0.2
1,171,507 - 2.5
1,171,513 - 0.3