Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7213

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7212: 15580 - KOG3764 Vesicular amine transporter, at 1142497 to 1144513 15580 mRNA_7213: 15581 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1144823 to 1146874 15581 mRNA_7214: 15582 - K17792 TIM54 mitochondrial import inner membrane translocase subunit TIM54, at 1147012 to 1148920 15582

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
1,144,008 + 15580 mRNA_7212 0.75 -0.4
1,144,012 - 15580 mRNA_7212 0.75 0.3
1,144,014 + 15580 mRNA_7212 0.75 0.1
1,144,135 - 15580 mRNA_7212 0.81 0.1
1,144,150 + 15580 mRNA_7212 0.82 0.7
1,144,410 + 0.2
1,144,476 + -1.8
1,144,525 - 1.1
1,144,568 - -1.3
1,144,747 - -1.9
1,144,763 - -0.0
1,145,055 + 15581 mRNA_7213 0.11 1.3
1,145,206 + 15581 mRNA_7213 0.19 -0.6
1,145,471 - 15581 mRNA_7213 0.32 -0.6
1,145,623 + 15581 mRNA_7213 0.39 0.1
1,145,624 - 15581 mRNA_7213 0.39 -2.1
1,145,633 - 15581 mRNA_7213 0.39 -0.3
1,145,638 - 15581 mRNA_7213 0.40 -0.1
1,145,935 + 15581 mRNA_7213 0.54 2.2
1,146,960 + -0.1